Dialign-Pfam

Dialign-Pfam

Dialign-Pfam identifies possible domains in protein sequences by scanning the input sequences using HMMER against PFAM database. It then uses this information to align protein sequences using Dialign.

Input Sequences

Paste your sequences in multiple FASTA format:

Or, upload your sequences file in multiple FASTA format:

Thresholds

HMMER assigns quality scores to matches between sequences and models of proteins and domains in a database. In order to control which hits are used by our algorithm, we use two threshold values for E-values of HMMER hits.

E_m: E_d:

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